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Tapial J, Ha KCH, Sterne-Weiler T, Gohr A, Braunschweig U, Hermoso-Pulido A, Quesnel-Vallieres M, Permanyer J, Sodaei R, Marquez Y, Cozzuto L, Wang X, Gomez-Velazquez M, Rayon T, Manzanares M, Ponomarenko J, Blencowe B, Irimia M. An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms. Genome Res (2017) 27:1759-68
Link to the full text in Repisalud
Gomez-Velazquez M, Badia-Careaga C, Lechuga-Vieco AV, Nieto-Arellano R, Tena JJ, Rollan I, Alvarez A, Torroja C, Caceres EF, Roy A, Galjart N, Delgado-Olguin P, Sanchez-Cabo F, Enriquez JA, Gomez-Skarmeta JL, Manzanares M. CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart. PLoS Genet (2017) 13:e1006985
Link to the full text in Repisalud
Bogdanovic O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra GJ, Manzanares M, Sauka-Spengler T, Ecker JR, Vermeulen M, Gomez-Skarmeta JL, Lister R. Active DNA demethylation at enhancers during the vertebrate phylotypic period. Nat Genet (2016) 48:417-26
Soro-Arnaiz I, Li QO, Torres-Capelli M, Melendez-Rodriguez F, Veiga S, Veys K, Sebastian D, Elorza A, Tello D, Hernansanz-Agustin P, Cogliati S, Moreno-Navarrete JM, Balsa E, Fuertes E, Romanos E, Martinez-Ruiz A, Enriquez JA, Fernandez-Real JM, Zorzano A, De Bock K, Aragones J. Role of Mitochondrial Complex IV in Age-Dependent Obesity. Cell Rep (2016) 16:2991-3002
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Rayon T, Menchero S, Rollan I, Ors I, Helness A, Crespo M, Nieto A, Azuara V, Rossant J, Manzanares M. Distinct mechanisms regulate Cdx2 expression in the blastocyst and in trophoblast stem cells. Sci Rep (2016) 6:27139
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Aguirre LA, Alonso ME, Badia-Careaga C, Rollan I, Arias C, Fernandez-Minan A, Lopez-Jimenez E, Aranega A, Gomez-Skarmeta JL, Franco D, Manzanares M. Long-range regulatory interactions at the 4q25 Atrial Fibrillation risk locus involve PITX2c and ENPEP. BMC Biol (2015) 13:26
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Smemo S, Tena JJ, Kim KH, Gamazon ER, Sakabe NJ, Gomez-Marin C, Aneas I, Credidio FL, Sobreira DR, Wasserman NF, Lee JH, Puviindran V, Tam D, Shen M, Son JE, Vakili NA, Sung HK, Naranjo S, Acemel RD, Manzanares M, Nagy A, Cox NJ, Hui CC, Gomez-Skarmeta JL, Nobrega MA Obesity-associated variants within FTO form long-range functional connections with IRX3 Nature (2014) 507:371-5
Rayon T, Menchero S, Nieto A, Xenopoulos P, Crespo M, Cockburn K, Cañon S, Sasaki H, Hadjantonakis AK, de la Pompa JL, Rossant J, Manzanares M. Notch and hippo converge on cdx2 to specify the trophectoderm lineage in the mouse blastocyst. Dev Cell (2014) 30:410-22

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