SanXoT software package - Revision history

Mtrevisan: /* Getting started */

2018-08-08T10:47:10Z

‎Getting started

2018-08-08T07:42:00Z

2018-03-14T15:06:20Z

2018-03-12T14:10:21Z

licence note

2018-03-05T14:57:33Z

2018-02-28T14:01:56Z

2018-02-28T13:33:54Z

2018-02-19T14:33:46Z

2018-02-19T14:16:44Z

2018-02-01T14:10:30Z

added LogMasher

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 == Getting started ==
-You can check '''[[how to use SanXoT]]''' for a general overview of the package, its design, data structure and building of workflows.
+You can check '''[[How to use SanXoT|how to use SanXoT]]''' for a general overview of the package, its design, data structure and building of workflows.
 == Unit test ==

@@ Line 7: / Line 7: @@
 You can download windows standalone executables or the source code from GitHub:
 '''[https://github.com/CNIC-Proteomics/SanXoT https://github.com/CNIC-Proteomics/SanXoT]'''
 == Unit test ==

← Older revision		Revision as of 15:06, 14 March 2018
Line 1:		Line 1:
		+	[[File:SanXoT main modules.png\|thumb\|600px\|Diagram showing the main modules used in the SanXoT software package.]]
		+
	The '''SanXoT software package''' is a bioinformatic resource made in the Cardiovascular Proteomics Lab at CNIC to build workflows for quantitative high-throughput proteomics, systems biology and the statistical analysis, integration and comparison of experiments.		The '''SanXoT software package''' is a bioinformatic resource made in the Cardiovascular Proteomics Lab at CNIC to build workflows for quantitative high-throughput proteomics, systems biology and the statistical analysis, integration and comparison of experiments.

@@ Line 37: / Line 37: @@
 ::* '''[[Aljamia]]''', for parsing data between text files with tab separated tables.
 ::* '''[[LogMasher]]''', to collect variances from log files generated by SanXoT for a given path.
 [[Category:SanXoT software package]]

@@ Line 4: / Line 4: @@
 You can download windows standalone executables or the source code from GitHub:
-[https://github.com/CNIC-Proteomics/SanXoT https://github.com/CNIC-Proteomics/SanXoT]
+'''[https://github.com/CNIC-Proteomics/SanXoT https://github.com/CNIC-Proteomics/SanXoT]'''
 == Unit test ==

@@ Line 1: / Line 1: @@
 The '''SanXoT software package''' is a bioinformatic resource made in the Cardiovascular Proteomics Lab at CNIC to build workflows for quantitative high-throughput proteomics, systems biology and the statistical analysis, integration and comparison of experiments.
-=== Unit test ===
+== Download ==
 You can check the '''[[unit tests for SanXoT]]''' or '''[[exploring SanXoT features|explore SanXoT features]]'''.
-=== Programs included ===
+== Programs included ==
 :For performing statistics:

@@ Line 3: / Line 3: @@
 === Unit test ===
-You can check [[Unit tests for SanXoT]].
+You can check '''[[Unit tests for SanXoT]]'''.
 === Programs included ===

← Older revision		Revision as of 14:16, 19 February 2018
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	::* '''[[Aljamia]]''', for parsing data between text files with tab separated tables.		::* '''[[Aljamia]]''', for parsing data between text files with tab separated tables.
	::* '''[[LogMasher]]''', to collect variances from log files generated by SanXoT for a given path.		::* '''[[LogMasher]]''', to collect variances from log files generated by SanXoT for a given path.
		+
		+	[[Category:SanXoT software package]]

← Older revision		Revision as of 14:10, 1 February 2018
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	::* '''[[CataPep]]''', a tool to make zero the XCorrs of all PSMs in an MSF file, excluding those provided in a white list.		::* '''[[CataPep]]''', a tool to make zero the XCorrs of all PSMs in an MSF file, excluding those provided in a white list.
	::* '''[[Aljamia]]''', for parsing data between text files with tab separated tables.		::* '''[[Aljamia]]''', for parsing data between text files with tab separated tables.
		+	::* '''[[LogMasher]]''', to collect variances from log files generated by SanXoT for a given path.