Tools

FineSplice, enhanced splice junction detection and estimation from RNA-Seq data

FineSplice is a Python wrapper to TopHat 2 geared towards splice junction detection at superior precision.

Check latest version at https://sourceforge.net/p/finesplice/

MouBeAT, Mouse Behavioral Analysis Toolbox

MouBeAT is an open toolbox for guided analysis of behavioral tests in mice

Link to download: https://github.com/helioalexandre/MouBeAT

Link to paper: https://www.frontiersin.org/articles/10.3389/fnbeh.2018.00201/full

ATtRACT

https://attract.cnic.es/

Papers

dSreg: a Bayesian model to integrate changes in splicing and RNA-binding protein activity.