Selected publications

Adrover JM, Aroca-Crevillen A, Crainiciuc G, Ostos F, Rojas-Vega Y, Rubio-Ponce A, Cilloniz C, Bonzon-Kulichenko E, Calvo E, Rico D, Moro MA, Weber C, Lizasoain I, Torres A, Ruiz-Cabello J, Vazquez J, Hidalgo A Programmed 'disarming' of the neutrophil proteome reduces the magnitude of inflammation Nat Immunol (2020) Jan 7 [Epub ahead of print]
Bonzon-Kulichenko E, Camafeita E, Lopez JA, Gomez-Serrano M, Jorge I, Calvo E, Nunez E, Trevisan-Herraz M, Bagwan N, Barcena JA, Peral B, Vazquez J Improved integrative analysis of the thiol redox proteome using filter-aided sample preparation J Proteomics (2020) 214:103624
Tomás-Loba A, Manieri E, González-Terán B, Mora A, Leiva-Vega L, Santamans AM, Romero-Becerra R, Rodríguez E, Pintor-Chocano A, Feixas F, López JA, Caballero B, Trakala M, Blanco Ó, Torres JL, Hernández-Cosido L, Montalvo-Romeral V, Matesanz N, Roche-Molina M, Bernal JA, Mischo H, León M, Caballero A, Miranda-Saavedra D, Ruiz-Cabello J, Nevzorova YA, Cubero FJ, Bravo J, Vázquez J, Malumbres M, Marcos M, Osuna S, Sabio G. p38gamma is essential for cell cycle progression and liver tumorigenesis Nature (2019) 568:557-60
Ruiz-Meana M, Minguet M, Bou-Teen D, Miro-Casas E, Castans C, Castellano J, Bonzon-Kulichenko E, Igual A, Rodriguez-Lecoq R, Vazquez J, Garcia-Dorado D. Ryanodine Receptor Glycation Favors Mitochondrial Damage in the Senescent Heart. Circulation (2019) 139:949-64
Martinez-Lopez D, Camafeita E, Cedo L, Roldan-Montero R, Jorge I, Garcia-Marques F, Gomez-Serrano M, Bonzon-Kulichenko E, Blanco-Vaca F, Blanco-Colio LM, Michel JB, Escola-Gil JC, Vazquez J, Martin-Ventura JL APOA1 oxidation is associated to dysfunctional high-density lipoproteins in human abdominal aortic aneurysm EBioMedicine (2019) 43:43-53
Link to the full text in Repisalud
Trevisan-Herraz M, Bagwan N, Garcia-Marques F, Rodriguez JM, Jorge I, Ezkurdia I, Bonzon-Kulichenko E, Vazquez J. SanXoT: a modular and versatile package for the quantitative analysis of high-throughput proteomics experiments. Bioinformatics (2019) 35:1594-6
Link to the full text in Repisalud
Bagwan N, Bonzon-Kulichenko E, Calvo E, Lechuga-Vieco AV, Michalakopoulos S, Trevisan-Herraz M, Ezkurdia I, Rodriguez JM, Magni R, Latorre-Pellicer A, Enriquez JA, Vazquez J. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Rep (2018) 23:3685-97
Link to the full text in Repisalud
Binek A, Fernandez-Jimenez R, Jorge I, Camafeita E, Lopez JA, Bagwan N, Galan-Arriola C, Pun A, Aguero J, Fuster V, Ibanez B, Vazquez J. Proteomic footprint of myocardial ischemia/reperfusion injury: Longitudinal study of the at-risk and remote regions in the pig model. Sci Rep (2017) 7:12343
Link to the full text in Repisalud
Latorre-Pellicer A, Moreno-Loshuertos R, Lechuga-Vieco AV, Sánchez-Cabo F, Torroja C, Acín-Pérez R, Calvo E, Aix E, González-Guerra A, Logan A, Bernad-Miana ML, Romanos E, Cruz R, Cogliati S, Sobrino B, Carracedo Á, Pérez-Martos A, Fernández-Silva P, Ruíz-Cabello J, Murphy MP, Flores I, Vázquez J, Enríquez JA. Mitochondrial and nuclear DNA matching shapes metabolism and healthy ageing. Nature (2016) 525:561-65
Cogliati S*, Calvo E*, Loureiro M, Guaras AM, Nieto-Arellano R, Garcia-Poyatos C, Ezkurdia I, Mercader N, Vazquez J*, Enriquez JA* (SC and EC contributed equally; JV and JAE are co-corresponding authors) Mechanism of super-assembly of respiratory complexes III and IV. Nature (2016) 539:579-82
Calvo E, Garcia-Alvarez A, Vazquez J. The Quest for Metabolic Biomarkers of Pulmonary Hypertension. J Am Coll Cardiol (2016) 67:190-2
Guaras A, Perales-Clemente E, Calvo E, Acin-Perez R, Loureiro-Lopez M, Pujol C, Martinez-Carrascoso I, Nunez E, Garcia-Marques F, Rodriguez-Hernandez MA, Cortes A, Diaz F, Perez-Martos A, Moraes CT, Fernandez-Silva P, Trifunovic A, Navas P, Vazquez J, Enriquez JA. The CoQH2/CoQ Ratio Serves as a Sensor of Respiratory Chain Efficiency. Cell Rep (2016) 15:197-209
Link to the full text in Repisalud
García-Marqués F, Trevisan-Herraz M, Martínez-Martínez S, Camafeita E, Jorge I, Lopéz JA, Méndez-Barbero N, Méndez-Ferrer S, Del Pozo MÁ, Ibáñez B, Andrés V, Sánchez-Madrid F, Redondo JM, Bonzon-Kulichenko E, Vázquez J. A novel systems-biology algorithm for the analysis of coordinated protein responses using quantitative proteomics Mol Cell Proteomics (2016) 15:1740-60
Burillo E, Jorge I, Martinez-Lopez D, Camafeita E, Blanco-Colio LM, Trevisan-Herraz M, Ezkurdia I, Egido J, Michel JB, Meilhac O, Vazquez J, Martin-Ventura JL. Quantitative HDL Proteomics Identifies Peroxiredoxin-6 as a Biomarker of Human Abdominal Aortic Aneurysm. Sci Rep (2016) 6:38477
Link to the full text in Repisalud
Bonzon-Kulichenko E, Garcia-Marques F, Trevisan-Herraz M, Vazquez J. Revisiting Peptide Identification by High-Accuracy Mass Spectrometry: Problems Associated with the Use of Narrow Mass Precursor Windows J Proteome Res (2015) 14:700-10
Ruiz-Meana M*, Nunez E*, Miro-Casas E, Martinez-Acedo P, Barba I, Rodriguez-Sinovas A, Inserte J, Fernandez-Sanz C, Hernando V, Vazquez J*, Garcia-Dorado D* (MRM and EN contributed equally; JV and DGD co-corresponding authors) Ischemic preconditioning protects cardiomyocyte mitochondria through mechanisms independent of cytosol. J Mol Cell Cardiol (2014) 68:79-88
Navarro P*, Trevisan-Herraz M*, Bonzon-Kulichenko E*, Nunez E, Martinez-Acedo P, Perez-Hernandez D, Jorge I, Mesa R, Calvo E, Carrascal M, Hernaez ML, Garcia F, Barcena JA, Ashman K, Abian J, Gil C, Redondo JM and Vazquez J (PN, MTH and EBK contributed equally) General Statistical Framework for Quantitative Proteomics by Stable Isotope Labeling. J Proteome Res (2014) 13:1234-47
Ezkurdia I, Vazquez J, Valencia A, Tress M Analyzing the First Drafts of the Human Proteome J Proteome Res (2014) 13:3854-5
Jorge I, Burillo E, Mesa R, Baila-Rueda L, Moreno M, Trevisan-Herraz M, Silla-Castro JC, Camafeita E, Ortega-Muñoz M, Bonzon-Kulichenko E, Calvo I, Cenarro A, Civeira F, Vázquez J The human HDL proteome displays high inter-individual variability and is altered dynamically in response to angioplasty-induced atheroma plaque rupture J Proteomics (2014) 106C:61-73
Martinez-Acedo P, Nunez E, Sanchez-Gomez FJ, Moreno M, Ramos E, Izquierdo-Alvarez A, Miro-Casas E, Mesa R, Rodriguez P, Martinez-Ruiz A, Garcia-Dorado D, Lamas S, Vazquez J. GELSILOX: a novel strategy for global analysis of the dynamic thiol redox proteome Mol Cell Proteomics (2012) 11:800-13